December 2020 - MARMAM - devlists.uvic.ca

Consequences of culturally-driven ecological specialization: Killer whales and beyond
by Hal Whitehead 12 Jun '26

12 Jun '26

The following paper has just been published: Consequences of culturally-driven ecological specialization: Killer whales and beyond. by: Hal Whitehead and John K.B. Ford Journal of Theoretical Biology 456: 279-294 Abstract: Culturally-transmitted ecological specialization occurs in killer whales, as well as other species. We hypothesize that some of the remarkable demographic and ecological attributes of killer whales result from this process. We formalize and model (using agent-based stochastic models parametrized using killer whale life history) the cultural evolution of specialization by social groups, in which a narrowing of niche breadth is spread and maintained in a group through social learning. We compare the demographic and ecological results of cultural specialization to those of a similar model of specialization through natural selection. We found that specialization, through either the cultural or natural selection routes, is adaptive in the short term with specialization often increasing fitness. Generalization, in contrast, is rarely adaptive. The cultural evolution of specialization can lead to increased rates of group extirpation. Specialization has little effect on group size but tends to reduce population size and resource abundance. While the two specialization processes produce similar results, cultural specialization can be very much faster. The results are generally consistent with what we know of the formation and maintenance of specialist ecotypes in killer whales, and have implications for the persistence, nature and ecological effects of these apex predators. You can read a .pdf at: http://whitelab.biology.dal.ca/labpub.htm Hal Whitehead Dalhousie University hwhitehe(a)dal.ca

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Update to SOCPROG
by Hal Whitehead 01 Jul '24

01 Jul '24

A new and updated version of SOCPROG, SOCPROG2.9 (both compiled and uncompiled downloads) is available at: http://whitelab.biology.dal.ca/SOCPROG/social.htm SOCPROG is a MATLAB-based package of programs for the analysis of animal social structures, movements and populations. The compiled version does not need MATLAB itself. This version is compatible with MATLAB2018b (although it will likely work well on recent and soon-to-be-released versions of MATLAB). It fixes a few bugs and adds functionality compared to previous versions (especially association complexity). Thanks Hal Whitehead, Dalhousie University, Canada

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Re: [MARMAM] Manatee Position in Melbourne Beach, FL
by Greer, Bill 21 Aug '23

21 Aug '23

https://jobs.myflorida.com/job/MELBOURNE-BEACH-OPS-BIOLOGICAL-SCIENTIST-I-F… This position will assist in the coordination of salvage and recovery efforts of marine mammal carcasses for the Fish and Wildlife Research Institute (FWRI) East Central Field Laboratory. The incumbent will serve as member of FWC’s manatee necropsy team conducting field and laboratory necropsies on manatee and other marine mammal carcasses, record observations and complete associated necropsy reports. This position will recover marine mammal carcasses for necropsy from the East Central region (coastal and inland waterways of southern Volusia County through Indian River County) of Florida and assist in manatee rescue and transport operations in the East Central region as well as assist with manatee rescue and capture operations away from designated area as needed. This position will be responsible for preparation and labeling of sample containers, carcass disposal, and cleaning of equipment and instruments. This position will be responsible for managing the East Central region’s intern and volunteer network which includes identifying candidates, interviewing, tracking their effort and training when needed. This position will be responsible for deployment, retrieval, maintenance and data collection of temperature probes throughout the winter months. This position will be responsible for assisting with other East Central regions projects such as photo identification and assisting with basic maintenance of vehicles, trailers and vessels as well purchasing needs and other tasks as assigned by supervisor. This position will assist with aerial surveys for manatees as needed. This position will have an assigned work schedule of Tuesday to Saturday (8:00 am-5:00 pm) and will be asked to respond to marine mammal emergencies and carcasses outside of normal work schedule as needed or assigned. This position will serve in a rotation with other East Central staff members for the purpose of covering the East Central Region during state holidays. Knowledge, Skills, and Abilities: * Knowledge of the Florida Manatee Recovery Plan and state and federal legislation protecting manatees * Knowledge of methods of data collection and principles and techniques of research and analysis * Knowledge of marine mammal anatomy and necropsy techniques * Knowledge of digital SLR cameras, filters, and lenses * Knowledge of marine mammal capture, handling, and transport techniques * Able to trailer flatbeds/utility trailers and watercraft vessels * Able to safely operate watercraft vessels 26’ in length and smaller * Be capable of daily manual labor requiring handling of heavy and sharp objects and working under unpleasant conditions * Must be physically fit, able to vertically lift at least 75 lbs, and be able to swim sufficiently to save oneself * Able to conduct fieldwork in all weather conditions * Able to establish and maintain effective working relationships * Be comfortable speaking to the public * Possess or be able to obtain and maintain a Florida driver’s license within a month of employment Minimum Requirements: A bachelor’s degree from an accredited college or university with a major in one of the biological sciences. Experience with dissection, pathology, or animal necropsies and data management. **Preference may be given to candidates who have experience with dissection, pathology, or animal necropsies and data management; having live and dead marine mammal stranding/necropsy experience; having photo-id collection experience in the field; or experience working alongside volunteers/interns. WHAT IS OPS EMPLOYMENT? Other Personal Services (OPS) temporary employer/employee relationship used solely for accomplishing short term or intermittent tasks. OPS employees do not fill established positions and may not be assigned the duties of any vacant authorized position. OPS employees are at-will employees and are subject to actions such as pay changes, changes to work assignment and terminations at the pleasure of the agency head or designee. WHAT BENEFITS ARE APPLICABLE TO OPS EMPLOYEES? * State of Florida 401(a) FICA Alternative Plan - mandatory * Workers’ Compensation - mandatory * Reemployment Assistance (Unemployment Compensation) - mandatory * Participation in state group insurance (must meet eligibility requirements. Consult with People First or the servicing Human Resource Office for details.) * Deferred Compensation - voluntary * Employee Assistance Program – voluntary WHAT BENEFITS ARE NOT APPLICABLE TO OPS EMPLOYEES? * Any form of paid leave * Paid holidays * Participation in the Florida Retirement System * Reinstatement rights or retention rights Application Process: Applicants are required to submit a complete, up-to-date, State of Florida Employment Application Form electronically in People First (http://peoplefirst.myflorida.com<http://peoplefirst.myflorida.com/>) by the closing date listed. Resumes and supporting documentation may be submitted at the same time you are applying online, faxed, or mailed to People First, but do not replace the requirement for a completed State of Florida Employment Application Form. The State of Florida is an Equal Opportunity Employer/Affirmative Action Employer and does not tolerate discrimination or violence in the workplace. Applicants requiring a reasonable accommodation, as defined by the Americans with Disabilities Act, must notify the agency hiring authority and/or the People First Service Center (1-877-562-7287). Notification to the hiring authority must be made in advance to allow sufficient time to provide the accommodation. The State of Florida hires only U.S. citizens and lawfully authorized alien workers. If a conditional offer of employment is made, you will be required to provide identification and proof of citizenship or authorization to work in the United States for the hiring authority to which application is made. The State of Florida is an Equal Opportunity Employer/Affirmative Action Employer, and does not tolerate discrimination or violence in the workplace. Candidates requiring a reasonable accommodation, as defined by the Americans with Disabilities Act, must notify the agency hiring authority and/or People First Service Center (1-866-663-4735). Notification to the hiring authority must be made in advance to allow sufficient time to provide the accommodation. The State of Florida supports a Drug-Free workplace. All employees are subject to reasonable suspicion drug testing in accordance with Section 112.0455, F.S., Drug-Free Workplace Act. Nearest Major Market: Melbourne Bill Greer Marine Mammal Biologist Melbourne Beach Marine Mammal Lab 4020 South Highway A1A Melbourne Beach, Florida 32951 Cell (321) 626-7367 Office (321) 953-5037 [FWC LOGO1] Wildlife Alert: 1-888-404-3922 From: Greer, Bill Sent: Friday, October 18, 2019 7:44 PM To: marmam(a)lists.uvic.ca Subject: Manatee Position in Melbourne Beach, FL https://jobs.myflorida.com/job/MELBOURNE-BEACH-OPS-BIOLOGICAL-SCIENTIST-I-F… Bill Greer Marine Mammal Biologist Melbourne Beach Marine Mammal Lab 4020 South Highway A1A Melbourne Beach, Florida 32951 Cell (321) 626-7367 Office (321) 953-5037 [FWC LOGO1] Wildlife Alert: 1-888-404-3922

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New Online Training Course: An Introduction To Integrating QGIS/GIS And R For Spatial Analysis - 6th to 8th May 2020
by cdmacleod＠gisinecology.com 20 Jan '23

20 Jan '23

We will be running a new online training course called 'An Introduction To Integrating QGIS/GIS and R For Spatial Analysis' between the 6th and 8th of May 2020. It will be held via the Zoom video-conferencing platform. This course is aimed at those who wish to learn how to use and integrate QGIS (the leading freely available GIS software package) and R (the leading freely available data analysis software package) for spatial analysis. It will be taught by Dr. Colin D. MacLeod, the author of 'An Introduction To Integrating QGIS And R for Spatial Analysis [1]' (Pictish Beast Publications) and a renowned expert in using GIS in biological and ecological research. He is also a co-author of the recenntly publised 'An Introduction To Basic Statistics For Biologists Using R [2]', which is a practical guide to carrying out the analysis of biological data in R. The course assumes no prior knowledge of either QGIS/GIS or R, and so is open to complete beginners as well as those how know how to use one of these software packages, and wish to learn how to integrate it with the other. Attendance will be limited to a maximum of 16 people. The course for this three day course will cost GBP 395 per person (with a discounted rate of GBP 300 for students, the unwaged and those working for registered charities). To book a place, or for more information, visit http://gisinecology.com/online-course-an-introduction-to-integrating-qgis-g… or email info(a)GISinEcology.com. GIS and statistical analysis are two of the most fundamental software tools for marine mammalogists wishing to conduct spatial analyses, which is, itself, a cornerstone for the management and conservation of marine mammal species. However, GIS and statistical analyses have their own sets of software packages, and sometimes it can be difficult to know how to integrate the two. This course will provide an introduction to the integration of QGIS (the leading freely available GIS software package) and R (the leading data analysis software packages used by biologists) to create a combined tool set that makes the most of the strengths of each of these individual software packages. It will consist of a series of background sessions on using GIS and R for spatial analysis, mixed in with practical sessions where you will learn how to use QGIS, how to use R, and how to integrate two to complete a spatial analysis project. This last part will include working through an example project, starting with creating a high quality map for publication through creating raster data layers of environmental variables, joining data together based on their spatial relationships and analysing the combined data set using R (including creating summary statistics, conducting linear regressions and conducting generalised additive modelling - GAMs). While it will primarily be based around QGIS, this course is taught using software-independent approach, and it is also open to those who wish to learn how to use ArcGIS to do biological GIS. When you attend this course you will receive a free copy of An Introduction To Integrating QGIS And R for Spatial Analysis [1] (GIS For Biologists Workbooks) as the practical exercises in that course are based on the ones contained in that book. NOTE: If you wish to use ArcGIS software for this course, alternative materials will be provided for the practical sessions. ================================================================================== GIS IN ECOLOGY - Providing Training, Advice And Consultancy On The Use Of GIS In Ecology Web: www.GISinEcology.com Email: info(a)GISinEcology.com Need to ask a question about using GIS? Try the GIS In Ecology Forum: www.GISinEcology.com/GIS_in_Ecology_forum.htm Books From GIS In Ecology Staff: GIS For Biologists: A Practical Introduction For Undergraduates; RRP: £24.99 An Introduction To Using GIS In Marine Biology; RRP: £44.99 An Introduction To Using GIS In Marine Biology: Supplementary Workbook One - Creating Maps Of Species Distribution; RRP: £19:99 If you wish to purchase these books, visit: http://www.gisinecology.com/Book_Shop.htm To help the environment, please do not print out this email unless it is unavoidable. ================================================================================== Links: ------ [1] http://gisinecology.com/an-introduction-to-integrating-qgis-and-r-for-spati… [2] http://gisinecology.com/stats-for-biologists-1

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New paper on spatial variabilities in humpback whale acoustic presence in the Southern Ocean
by Elena Schall 19 Aug '22

19 Aug '22

We are pleased to announce our new paper in Royal Society Open Science on humpback whales in the Southern Ocean: *Large-scale spatial variabilities in the humpback whale acoustic presence in the Atlantic sector of the Southern Ocean* Elena Schall, Karolin Thomisch, Olaf Boebel, Gabriele Gerlach, Stefanie Spiesecke and Ilse Van Opzeeland Southern Hemisphere humpback whales (/Megaptera novaeangliae/) inhabit a wide variety of ecosystems including both low- and high-latitude areas. Understanding the habitat selection of humpback whale populations is key for humpback whale stock management and general ecosystem management. In the Atlantic sector of the Southern Ocean (/ASSO/), the investigation of baleen whale distribution by sighting surveys is temporally restricted to the austral summer. The implementation of autonomous passive acoustic monitoring, in turn, allows the study of vocal baleen whales year-round. This study describes the results of analysing passive acoustic data spanning 12 recording positions throughout the/ASSO/applying a combination of automatic and manual analysis methods to register humpback whale acoustic activity. Humpback whales were present at nine recording positions with higher acoustic activities towards lower latitudes and the eastern and western edges of the/ASSO/. During all months, except December (the month with the fewest recordings), humpback whale acoustic activity was registered in the/ASSO/. The acoustic presence of humpback whales at various locations in the/ASSO/confirms previous observations that part of the population remains in high-latitude waters beyond austral summer, presumably to feed. The spatial and temporal extent of humpback whale presence in the/ASSO/suggests that this area may be used by multiple humpback whale breeding populations as a feeding ground. The paper is available with open access under the following link: https://royalsocietypublishing.org/doi/10.1098/rsos.201347 Best regards, Elena Schall -- Elena Schall PhD Student Ocean Acoustics Lab Alfred Wegener Institute Helmholtz Centre for Polar and Marine Research Klußmannstr. 3d 27570 Bremerhaven email: elena.schall(a)awi.de Phone: +49(471)4831-2157

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Registration open for Fall 2020 - Aquatic Animal Conservation Issues
by Larkin,Iskande (Iske) 18 Jul '22

18 Jul '22

Hi All, The University of Florida, College of Veterinary Medicine would like to send notice that registration for our fall online course is open. Aquatic Animal Conservation Issues is an online course (3 credits) designed to introduce students (upper level undergraduate and graduate) and professionals (with an AA or higher degree) to the controversial issues surrounding aquatic animal species ranging from invertebrates to marine mammals, with an emphasis on marine mammals, but also including sea turtles, fisheries, and aquatic ecosystems. Students enrolled at any College or University within the US or internationally can take this course. For more information about this class or enrollment, contact Dr. Iske Larkin (ivlarkin(a)ufl.edu<mailto:ivlarkin@ufl.edu> ). If you are interested in taking this class, registration is now open for Fall (2020). The semester runs from Monday, August 31st - Wednesday, December 9th. Sincerely, Dr Larkin [Description: AAH logo blue E-Mail Sig] Iske V. Larkin, PhD Lecturer & Education Coordinator Interim Director Aquatic Animal Health Program Department of Large Animal Clinical Sciences College of Veterinary Medicine University of Florida PO Box 100136 2015 SW 16th Ave Gainesville, Florida 32610 Office phone - 352-294-4095 Work cell - 352-494-1742 Fax - 352-392-8289 Program web page: http://aquatic.vetmed.ufl.edu<http://aquatic.vetmed.ufl.edu/> "To the world you might be one person, but to one person you might be the world." -Anonymous ________________________________ Please note that Florida has a broad public records law, and that all correspondence to or from University of Florida employees via email may be subject to disclosure.

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UF Spring online course - Aquatic Wildlife Health
by Larkin,Iskande (Iske) 08 Nov '21

08 Nov '21

Hi All, Registration is currently open for Spring 2020. The University of Florida, Aquatic Animal Health Program, is offering the following course for those that may be interested. Class begins Jan 6th and runs through Wednesday April 22nd. Registration will remain open until Friday, Jan 10th. Aquatic Wildlife Health Issues is an online course (3 credits) designed to introduce students (upper level undergraduate and graduate) and professionals (with an AA or higher degree) to the natural history, anatomy, physiology, behavior and common health issues of aquatic species: whales and dolphins, seals and sea lions, manatees, sea turtles, crocodilians, fish and invertebrates. For more information about the class or enrollment, contact Dr. Iskande Larkin (ivlarkin(a)ufl.edu)<mailto:ivlarkin@ufl.edu%29.*This> Sincerely, Dr Iske Larkin [Description: AAH logo blue E-Mail Sig] Iske V. Larkin, PhD Lecturer & Education Coordinator Interim Director Aquatic Animal Health Program Department of Large Animal Clinical Sciences College of Veterinary Medicine University of Florida PO Box 100136 2015 SW 16th Ave Gainesville, Florida 32610 Office phone - 352-294-4095 Work cell - 352-494-1742 Fax - 352-392-8289 Program web page: http://aquatic.vetmed.ufl.edu<http://aquatic.vetmed.ufl.edu/> "To the world you might be one person, but to one person you might be the world." -Anonymous ________________________________ Please note that Florida has a broad public records law, and that all correspondence to or from University of Florida employees via email may be subject to disclosure.

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New publication: Fatty acids and stable isotopes in southern right whale calves
by Cari Marón 18 May '21

18 May '21

Dear MARMAM community, My coauthors and I are pleased to announce our new paper: Marón CF, Budge SM, Ward RE, Valenzuela LO and others (2020) Fatty acids and stable isotopes (δ13C, δ15N) in southern right whale Eubalaena australis calves in relation to age and mortality at Península Valdés, Argentina. Mar Ecol Prog Ser 646:189-200. The paper is available online for users only at https://www.int-res.com/abstracts/meps/v646/p189-200/ ABSTRACT: Baleen whales accumulate fat reserves during the summer to sustain reproduction while fasting in the winter. The southern right whale Eubalaena australis population that calves off Península Valdés, Argentina, experienced high calf mortality events from 2003 to 2013 and poor nutritional states of mothers could be a contributing cause. Previous studies found that the population’s reproductive success is influenced by prey availability. Mothers unable to build sufficient fat reserves or feeding on prey with different nutritional value may fail to meet the demands of lactation. Milk is the only source of nutrients and energy for calves at Valdés, so their fatty acids (FAs) and stable isotopes should reflect their mother’s diet and feeding-ground locations. Here, we compared FA profiles and C and N stable isotopes of dead calves with those of living calves to evaluate the potential impact of maternal nutrition on calf survival. We found no differences in the FA composition of blubber in dead and living calves, indicating similar maternal diets. Likewise, the isotopic values of living and dead calves imply that their mothers had similar foraging ranges. However, FA composition was greatly affected by calf length, indicating effects of calf age and duration of nursing. These findings suggest that mothers of dead calves did not feed on different diets or feeding grounds compared to mothers of living calves. Future research should further assess the overall health and body condition of the Valdés southern right whale calves. Please do not hesitate to contact me (carimaron(a)gmail.com<mailto:carimaron@gmail.com>) if you have any queries regarding to this article or to request a PDF copy. Cheers, Cari Marón

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Summer Online Course - Manatee Health
by Larkin,Iskande (Iske) 24 Mar '21

24 Mar '21

Hi All, The University of Florida, College of Veterinary Medicine, Aquatic Animal Health Program would like to send notice that registration for our summer online course is open. Manatee Health and Conservation is an online course (3 credits) that will provide students (upper level undergraduate and graduate) and professionals (with an AA or higher degree) with a detailed overview of manatee natural history, health assessment, and research findings as well as explore conservation issues. More information about this class can be found here. Students enrolled at any College or University within the US or internationally can take this course. For more information about this classes or enrollment, contact Dr. Iskande Larkin (ivlarkin(a)ufl.edu<mailto:ivlarkin@ufl.edu> ). The first day of the semester is Monday May 13th. Sincerely, Dr Larkin [Description: AAH logo blue E-Mail Sig] Iske V. Larkin, PhD Lecturer & Education Coordinator Interim Director Aquatic Animal Health Program Department of Large Animal Clinical Sciences College of Veterinary Medicine University of Florida PO Box 100136 2015 SW 16th Ave Gainesville, Florida 32610 Office phone - 352-294-4095 Work cell - 352-494-1742 Fax - 352-392-8289 Program web page: http://aquatic.vetmed.ufl.edu<http://aquatic.vetmed.ufl.edu/> "To the world you might be one person, but to one person you might be the world." -Anonymous ________________________________ Please note that Florida has a broad public records law, and that all correspondence to or from University of Florida employees via email may be subject to disclosure. ________________________________

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New publication: Resistance and susceptibility of dolphins to cetacean morbillivirus (Kimberley Batley)
by Kimberley Batley 17 Mar '21

17 Mar '21

Dear all, My colleagues and I are pleased to announce the publication of the following paper: Batley KC, Sandoval‐Castillo J, Kemper CM, Attard, CRM, Zanardo, N, Tomo, I, Beheregaray, LB, Möller, LM (2018). Genome-wide association study of an unusual dolphin mortality event reveals candidate genes for susceptibility and resistance to cetacean morbillivirus. Evolutionary Applications. https://doi.org/10.1111/eva.12747 Abstract: Infectious diseases are significant demographic and evolutionary drivers of populations, but studies about the genetic basis of disease resistance and susceptibility are scarce in wildlife populations. Cetacean morbillivirus (CeMV) is a highly contagious disease that is increasing in both geographic distribution and incidence, causing unusual mortality events (UME) and killing tens of thousands of individuals across multiple cetacean species worldwide since the late 1980’s. The largest CeMV outbreak in the Southern Hemisphere reported to date occurred in Australia in 2013, where it was a major factor in a UME, killing mainly young Indo-Pacific bottlenose dolphins (Tursiops aduncus). Using cases (non-survivors) and controls (putative survivors) from the most affected population, we carried out a genome-wide association study to identify candidate genes for resistance and susceptibility to CeMV. The genomic dataset consisted of 278,147,988 sequence reads and 35,493 high quality SNPs genotyped across 38 individuals. Association analyses found highly significant differences in allele and genotype frequencies amongst cases and controls at 65 SNPs, and Random Forests conservatively identified eight as candidates. Annotation of these SNPs identified five candidate genes (MAPK8, FBXW11, INADL, ANK3, and ACOX3) with functions associated with stress, pain and immune responses. Our findings provide the first insights into the genetic basis of host defence to this highly contagious disease, enabling the development of an applied evolutionary framework to monitor CeMV resistance across cetacean species. Biomarkers could now be established to assess potential risk factors associated with these genes in other CeMV affected cetacean populations and species. These results could also possibly aid in the advancement of vaccines against morbilliviruses. The PDF is freely accessible at https://doi.org/10.1111/eva.12747 Regards, Kimberley Batley, on behalf of all co-authors Kimberley Batley PhD candidate Cetacean Ecology, Behaviour and Evolution Lab (CEBEL) Molecular Ecology Lab (MELFU) College of Science & Engineering, Flinders University P +61 8 8201 3865 | E kimberley.batley(a)flinders.edu.au www.cebel.org.au<http://www.cebel.org.au/> | www.molecularecology.flinders.edu.au<http://www.molecularecology.flinders.edu.au/>

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